Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sptlc1O35704 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sptlc1O35704 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sptlc1O35704 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sptlc1O35704 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sptlc1O35704 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sptlc1O35704 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptlc1O35704 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.5■□□□□ 0.87
Sptlc1O35704 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.5■□□□□ 0.87
Sptlc1O35704 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptlc1O35704 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Sptlc1O35704 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sptlc1O35704 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.49■□□□□ 0.87
Sptlc1O35704 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.49■□□□□ 0.87
Sptlc1O35704 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.49■□□□□ 0.87
Sptlc1O35704 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sptlc1O35704 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sptlc1O35704 Gm11249-201ENSMUST00000117071 859 ntBASIC20.48■□□□□ 0.87
Sptlc1O35704 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.48■□□□□ 0.87
Sptlc1O35704 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.48■□□□□ 0.87
Sptlc1O35704 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.48■□□□□ 0.87
Sptlc1O35704 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptlc1O35704 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sptlc1O35704 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptlc1O35704 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptlc1O35704 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptlc1O35704 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptlc1O35704 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sptlc1O35704 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptlc1O35704 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sptlc1O35704 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sptlc1O35704 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sptlc1O35704 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sptlc1O35704 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sptlc1O35704 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sptlc1O35704 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sptlc1O35704 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sptlc1O35704 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sptlc1O35704 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sptlc1O35704 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sptlc1O35704 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Sptlc1O35704 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Sptlc1O35704 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptlc1O35704 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sptlc1O35704 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptlc1O35704 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptlc1O35704 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.45■□□□□ 0.86
Sptlc1O35704 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.45■□□□□ 0.86
Sptlc1O35704 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptlc1O35704 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sptlc1O35704 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptlc1O35704 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptlc1O35704 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sptlc1O35704 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sptlc1O35704 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sptlc1O35704 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sptlc1O35704 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sptlc1O35704 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Sptlc1O35704 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sptlc1O35704 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Sptlc1O35704 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms