Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tnfsf11O35235 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.64□□□□□ -0.07
Tnfsf11O35235 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfsf11O35235 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.63□□□□□ -0.07
Tnfsf11O35235 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfsf11O35235 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.63□□□□□ -0.07
Tnfsf11O35235 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfsf11O35235 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.61□□□□□ -0.07
Tnfsf11O35235 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Fst-202ENSMUST00000223640 2612 ntBASIC14.61□□□□□ -0.07
Tnfsf11O35235 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfsf11O35235 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.6□□□□□ -0.07
Tnfsf11O35235 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.6□□□□□ -0.07
Tnfsf11O35235 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.6□□□□□ -0.07
Tnfsf11O35235 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tnfsf11O35235 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.6□□□□□ -0.07
Tnfsf11O35235 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfsf11O35235 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.59□□□□□ -0.07
Tnfsf11O35235 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf11O35235 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfsf11O35235 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.58□□□□□ -0.07
Tnfsf11O35235 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms