Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Sh2b3O09039 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.63■□□□□ 0.25
Sh2b3O09039 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.63■□□□□ 0.25
Sh2b3O09039 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sh2b3O09039 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.63■□□□□ 0.25
Sh2b3O09039 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sh2b3O09039 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.62■□□□□ 0.25
Sh2b3O09039 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Sh2b3O09039 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sh2b3O09039 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.62■□□□□ 0.25
Sh2b3O09039 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2b3O09039 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sh2b3O09039 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sh2b3O09039 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sh2b3O09039 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.61■□□□□ 0.25
Sh2b3O09039 Gm12441-201ENSMUST00000121806 588 ntBASIC16.61■□□□□ 0.25
Sh2b3O09039 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.61■□□□□ 0.25
Sh2b3O09039 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.61■□□□□ 0.25
Sh2b3O09039 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sh2b3O09039 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2b3O09039 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh2b3O09039 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh2b3O09039 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh2b3O09039 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.6■□□□□ 0.25
Sh2b3O09039 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.6■□□□□ 0.25
Sh2b3O09039 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sh2b3O09039 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sh2b3O09039 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2b3O09039 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh2b3O09039 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sh2b3O09039 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh2b3O09039 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2b3O09039 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2b3O09039 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
Sh2b3O09039 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.58■□□□□ 0.25
Sh2b3O09039 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2b3O09039 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2b3O09039 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Gm13146-201ENSMUST00000118508 780 ntBASIC16.58■□□□□ 0.24
Sh2b3O09039 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Gm38205-201ENSMUST00000192243 258 ntBASIC16.58■□□□□ 0.24
Sh2b3O09039 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sh2b3O09039 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2b3O09039 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2b3O09039 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2b3O09039 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.57■□□□□ 0.24
Sh2b3O09039 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2b3O09039 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh2b3O09039 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms