Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.18■□□□□ 0.66
Trove2O08848 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.18■□□□□ 0.66
Trove2O08848 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Trove2O08848 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Trove2O08848 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trove2O08848 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trove2O08848 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.18■□□□□ 0.66
Trove2O08848 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trove2O08848 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trove2O08848 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.16■□□□□ 0.66
Trove2O08848 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.16■□□□□ 0.66
Trove2O08848 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.16■□□□□ 0.66
Trove2O08848 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.16■□□□□ 0.66
Trove2O08848 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Trove2O08848 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
Trove2O08848 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trove2O08848 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trove2O08848 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trove2O08848 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.15■□□□□ 0.66
Trove2O08848 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trove2O08848 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.15■□□□□ 0.66
Trove2O08848 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trove2O08848 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trove2O08848 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.14■□□□□ 0.65
Trove2O08848 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.14■□□□□ 0.65
Trove2O08848 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.14■□□□□ 0.65
Trove2O08848 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trove2O08848 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.14■□□□□ 0.65
Trove2O08848 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trove2O08848 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trove2O08848 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trove2O08848 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.13■□□□□ 0.65
Trove2O08848 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.13■□□□□ 0.65
Trove2O08848 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.13■□□□□ 0.65
Trove2O08848 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trove2O08848 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trove2O08848 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trove2O08848 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trove2O08848 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
Trove2O08848 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Trove2O08848 Gm13241-201ENSMUST00000094493 780 ntBASIC19.13■□□□□ 0.65
Trove2O08848 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trove2O08848 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.13■□□□□ 0.65
Trove2O08848 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trove2O08848 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trove2O08848 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trove2O08848 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.13■□□□□ 0.65
Trove2O08848 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms