Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClockO08785 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ClockO08785 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClockO08785 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
ClockO08785 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClockO08785 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClockO08785 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClockO08785 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ClockO08785 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClockO08785 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
ClockO08785 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ClockO08785 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ClockO08785 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClockO08785 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.79■□□□□ 0.44
ClockO08785 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ClockO08785 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.79■□□□□ 0.44
ClockO08785 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClockO08785 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClockO08785 Gm15546-201ENSMUST00000122095 826 ntBASIC17.79■□□□□ 0.44
ClockO08785 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClockO08785 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.79■□□□□ 0.44
ClockO08785 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClockO08785 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClockO08785 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
ClockO08785 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClockO08785 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClockO08785 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.78■□□□□ 0.44
ClockO08785 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClockO08785 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClockO08785 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ClockO08785 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.78■□□□□ 0.44
ClockO08785 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClockO08785 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClockO08785 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClockO08785 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ClockO08785 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ClockO08785 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClockO08785 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClockO08785 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClockO08785 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClockO08785 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.77■□□□□ 0.44
ClockO08785 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.77■□□□□ 0.44
ClockO08785 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClockO08785 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ClockO08785 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ClockO08785 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClockO08785 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClockO08785 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClockO08785 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClockO08785 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ClockO08785 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ClockO08785 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ClockO08785 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ClockO08785 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ClockO08785 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
ClockO08785 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.76■□□□□ 0.43
ClockO08785 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ClockO08785 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.76■□□□□ 0.43
ClockO08785 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClockO08785 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.75■□□□□ 0.43
ClockO08785 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.75■□□□□ 0.43
ClockO08785 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.75■□□□□ 0.43
ClockO08785 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClockO08785 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClockO08785 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ClockO08785 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClockO08785 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClockO08785 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ClockO08785 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ClockO08785 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
ClockO08785 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClockO08785 Gm7417-201ENSMUST00000192950 473 ntBASIC17.74■□□□□ 0.43
ClockO08785 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms