Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp35M0QWN7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.02■□□□□ 0.8
Usp35M0QWN7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp35M0QWN7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Usp35M0QWN7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Usp35M0QWN7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp35M0QWN7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp35M0QWN7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp35M0QWN7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp35M0QWN7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Gm12441-201ENSMUST00000121806 588 ntBASIC20.01■□□□□ 0.79
Usp35M0QWN7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Usp35M0QWN7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Usp35M0QWN7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Usp35M0QWN7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20■□□□□ 0.79
Usp35M0QWN7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20■□□□□ 0.79
Usp35M0QWN7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20■□□□□ 0.79
Usp35M0QWN7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Usp35M0QWN7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp35M0QWN7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Usp35M0QWN7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20■□□□□ 0.79
Usp35M0QWN7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Usp35M0QWN7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp35M0QWN7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp35M0QWN7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp35M0QWN7 Gm7290-201ENSMUST00000104990 617 ntBASIC19.98■□□□□ 0.79
Usp35M0QWN7 Gm12918-201ENSMUST00000120234 636 ntBASIC19.98■□□□□ 0.79
Usp35M0QWN7 Gm15710-201ENSMUST00000121821 636 ntBASIC19.98■□□□□ 0.79
Usp35M0QWN7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.98■□□□□ 0.79
Usp35M0QWN7 Gm5075-201ENSMUST00000196916 622 ntBASIC19.98■□□□□ 0.79
Usp35M0QWN7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.98■□□□□ 0.79
Usp35M0QWN7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.98■□□□□ 0.79
Usp35M0QWN7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp35M0QWN7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp35M0QWN7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Usp35M0QWN7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp35M0QWN7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Gm13534-201ENSMUST00000121169 513 ntBASIC19.96■□□□□ 0.79
Usp35M0QWN7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Gm4968-201ENSMUST00000071458 858 ntBASIC19.96■□□□□ 0.79
Usp35M0QWN7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp35M0QWN7 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.95■□□□□ 0.79
Usp35M0QWN7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms