Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim55G3X8Y1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.22■□□□□ 0.67
Trim55G3X8Y1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim55G3X8Y1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim55G3X8Y1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Trim55G3X8Y1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim55G3X8Y1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim55G3X8Y1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim55G3X8Y1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim55G3X8Y1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim55G3X8Y1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim55G3X8Y1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim55G3X8Y1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim55G3X8Y1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms