Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm3375-201ENSMUST00000203929 796 ntBASIC15.37■□□□□ 0.05
Chd6A3KFM7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Gm5186-201ENSMUST00000218781 920 ntBASIC15.36■□□□□ 0.05
Chd6A3KFM7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Gm45058-201ENSMUST00000205810 766 ntBASIC15.36■□□□□ 0.05
Chd6A3KFM7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Chd6A3KFM7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chd6A3KFM7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd6A3KFM7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Gm34391-201ENSMUST00000203706 907 ntBASIC15.34■□□□□ 0.05
Chd6A3KFM7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd6A3KFM7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd6A3KFM7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chd6A3KFM7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chd6A3KFM7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd6A3KFM7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd6A3KFM7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Chd6A3KFM7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd6A3KFM7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Chd6A3KFM7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd6A3KFM7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd6A3KFM7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Gm18958-201ENSMUST00000174258 762 ntBASIC15.31■□□□□ 0.04
Chd6A3KFM7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.31■□□□□ 0.04
Chd6A3KFM7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd6A3KFM7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.3■□□□□ 0.04
Chd6A3KFM7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chd6A3KFM7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms