Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.03□□□□□ -0.8
Ubr4A2AN08 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Ubr4A2AN08 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC10.02□□□□□ -0.8
Ubr4A2AN08 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ubr4A2AN08 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ubr4A2AN08 Gm5864-201ENSMUST00000202263 970 ntBASIC10.02□□□□□ -0.8
Ubr4A2AN08 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ubr4A2AN08 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.02□□□□□ -0.81
Ubr4A2AN08 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.02□□□□□ -0.81
Ubr4A2AN08 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.02□□□□□ -0.81
Ubr4A2AN08 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gm43672-201ENSMUST00000199072 1731 ntBASIC10.01□□□□□ -0.81
Ubr4A2AN08 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Mir6236-201ENSMUST00000184437 123 ntBASIC10.01□□□□□ -0.81
Ubr4A2AN08 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gm21559-201ENSMUST00000220638 855 ntBASIC10.01□□□□□ -0.81
Ubr4A2AN08 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gm5745-201ENSMUST00000183748 313 ntBASIC10.01□□□□□ -0.81
Ubr4A2AN08 AC140264.2-202ENSMUST00000218746 817 ntBASIC10.01□□□□□ -0.81
Ubr4A2AN08 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ubr4A2AN08 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.01□□□□□ -0.81
Ubr4A2AN08 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ubr4A2AN08 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ubr4A2AN08 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Ubr4A2AN08 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ubr4A2AN08 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10□□□□□ -0.81
Ubr4A2AN08 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10□□□□□ -0.81
Ubr4A2AN08 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10□□□□□ -0.81
Ubr4A2AN08 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ubr4A2AN08 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Gm18025-201ENSMUST00000221733 862 ntBASIC9.99□□□□□ -0.81
Ubr4A2AN08 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Mir5130-201ENSMUST00000175160 84 ntBASIC9.99□□□□□ -0.81
Ubr4A2AN08 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Gm29518-201ENSMUST00000190858 372 ntBASIC9.99□□□□□ -0.81
Ubr4A2AN08 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ubr4A2AN08 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms