Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm45444-201ENSMUST00000211394 898 ntBASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm5784-201ENSMUST00000179344 2478 ntBASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv3-3A0A140T8Q0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Grk6-206ENSMUST00000224995 2971 ntBASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-3A0A140T8Q0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm10399-202ENSMUST00000202768 748 ntBASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv3-3A0A140T8Q0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms