Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Gm20049-201ENSMUST00000219950 730 ntBASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Cfap99A0A140LIX9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap99A0A140LIX9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.35■■□□□ 1.17
Cfap99A0A140LIX9 Gm10252-201ENSMUST00000209541 832 ntBASIC22.35■■□□□ 1.17
Cfap99A0A140LIX9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap99A0A140LIX9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Cfap99A0A140LIX9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap99A0A140LIX9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap99A0A140LIX9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Gm13168-201ENSMUST00000121771 632 ntBASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Cfap99A0A140LIX9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cfap99A0A140LIX9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
Cfap99A0A140LIX9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Cfap99A0A140LIX9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.33■■□□□ 1.17
Cfap99A0A140LIX9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cfap99A0A140LIX9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Cfap99A0A140LIX9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cfap99A0A140LIX9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cfap99A0A140LIX9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cfap99A0A140LIX9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cfap99A0A140LIX9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Cfap99A0A140LIX9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap99A0A140LIX9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap99A0A140LIX9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap99A0A140LIX9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap99A0A140LIX9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap99A0A140LIX9 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms