Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbv29A0A0G2LB96 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv29A0A0G2LB96 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trbv29A0A0G2LB96 Rarb-207ENSMUST00000225921 2756 ntBASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv29A0A0G2LB96 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 Gm43137-201ENSMUST00000198052 594 ntBASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv29A0A0G2LB96 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv29A0A0G2LB96 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv29A0A0G2LB96 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv29A0A0G2LB96 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv29A0A0G2LB96 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.52■□□□□ 0.07
Trbv29A0A0G2LB96 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv29A0A0G2LB96 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms