Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav23A0A0G2JG17 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Gm26571-201ENSMUST00000181399 666 ntBASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Grk6-206ENSMUST00000224995 2971 ntBASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav23A0A0G2JG17 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav23A0A0G2JG17 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav23A0A0G2JG17 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav23A0A0G2JG17 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav23A0A0G2JG17 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Trav23A0A0G2JG17 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav23A0A0G2JG17 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav23A0A0G2JG17 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Trav23A0A0G2JG17 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav23A0A0G2JG17 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Gm13234-201ENSMUST00000120010 747 ntBASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Gm38205-201ENSMUST00000192243 258 ntBASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms