Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm43530-201ENSMUST00000195920 274 ntBASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.12□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms