Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.76■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1aA0A0A6YYP6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms