Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv3A0A0A6YYE2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trbv3A0A0A6YYE2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Gm13238-201ENSMUST00000117655 780 ntBASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv3A0A0A6YYE2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Serp2-204ENSMUST00000228055 705 ntBASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trbv3A0A0A6YYE2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv3A0A0A6YYE2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv3A0A0A6YYE2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms