Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trbv23A0A0A6YWQ1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv23A0A0A6YWQ1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv23A0A0A6YWQ1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv23A0A0A6YWQ1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trbv23A0A0A6YWQ1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv23A0A0A6YWQ1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv23A0A0A6YWQ1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.07■□□□□ 0.16
Trbv23A0A0A6YWQ1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm21956-201ENSMUST00000179946 522 ntBASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv23A0A0A6YWQ1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms