Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trav6d-3A0A075B6B3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-3A0A075B6B3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-3A0A075B6B3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-3A0A075B6B3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Gm12821-201ENSMUST00000120022 600 ntBASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.02■□□□□ -0
Trav6d-3A0A075B6B3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-3A0A075B6B3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-3A0A075B6B3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Gm35558-201ENSMUST00000222675 2219 ntBASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Gm27032-201ENSMUST00000183124 1116 ntBASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-3A0A075B6B3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms