Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.27■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms