Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8-1A0A075B641 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav8-1A0A075B641 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8-1A0A075B641 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8-1A0A075B641 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8-1A0A075B641 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8-1A0A075B641 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8-1A0A075B641 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8-1A0A075B641 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8-1A0A075B641 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8-1A0A075B641 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8-1A0A075B641 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav8-1A0A075B641 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Gm10420-201ENSMUST00000121713 882 ntBASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8-1A0A075B641 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8-1A0A075B641 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav8-1A0A075B641 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms