Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm37309-201ENSMUST00000194994 1639 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm5893-201ENSMUST00000135286 1880 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm22760-201ENSMUST00000102277 93 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm8802-201ENSMUST00000118633 740 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm27043-201ENSMUST00000182807 958 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm7839-201ENSMUST00000210755 673 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 D330037F02Rik-202ENSMUST00000217400 1247 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm9305-201ENSMUST00000220962 599 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm46342-201ENSMUST00000223411 602 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Olfr45-201ENSMUST00000084454 1035 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Olfr1224-ps1-201ENSMUST00000099792 936 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm37210-201ENSMUST00000192484 2004 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Gm1988-201ENSMUST00000188190 2565 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 AC164625.1-201ENSMUST00000214034 3036 ntBASIC9.64□□□□□ -0.87
Nup88Q8CEC0 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup88Q8CEC0 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm40309-201ENSMUST00000202699 1752 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 4930533K18Rik-203ENSMUST00000219192 1307 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Mir683-2-201ENSMUST00000102099 109 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm16418-201ENSMUST00000118577 171 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm14131-201ENSMUST00000119636 719 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm8778-201ENSMUST00000127246 1107 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm15585-201ENSMUST00000149696 670 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Mir683-1-201ENSMUST00000179371 109 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm26980-201ENSMUST00000183321 395 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm29041-201ENSMUST00000189199 380 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm42431-201ENSMUST00000196880 323 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm43013-201ENSMUST00000198216 247 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm43709-201ENSMUST00000199870 559 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm31579-201ENSMUST00000203306 966 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm44721-201ENSMUST00000206978 472 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm45698-201ENSMUST00000208537 1135 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm4739-201ENSMUST00000218296 633 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 AV026068-225ENSMUST00000225042 490 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 AC207128.1-201ENSMUST00000225928 799 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gm9761-201ENSMUST00000075650 492 ntBASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Gsdma2-202ENSMUST00000093938 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup88Q8CEC0 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms