Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC154589.1-201ENSMUST00000228694 604 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm4925-201ENSMUST00000092231 397 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm9104-201ENSMUST00000095268 483 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gsta1-201ENSMUST00000098537 875 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gle1-201ENSMUST00000019859 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm14445-201ENSMUST00000117051 1484 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Tox-201ENSMUST00000039987 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Rab2b-203ENSMUST00000167116 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 1700034J05Rik-201ENSMUST00000036592 3007 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Serpina3j-201ENSMUST00000109957 2155 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm7869-201ENSMUST00000121457 1322 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm16291-201ENSMUST00000147378 2594 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm37110-201ENSMUST00000192993 1628 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm44183-201ENSMUST00000203964 1628 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm11231-201ENSMUST00000117895 1706 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm44883-201ENSMUST00000206063 3258 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Bank1-205ENSMUST00000198206 2538 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm43465-201ENSMUST00000200367 2802 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm24607-201ENSMUST00000104373 133 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Cst10-203ENSMUST00000109939 606 ntTSL 2 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Ccl25-204ENSMUST00000110982 823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Kcnj13-201ENSMUST00000113212 1270 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm14610-201ENSMUST00000118358 966 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm11318-201ENSMUST00000118640 961 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm12345-201ENSMUST00000119288 898 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm15702-201ENSMUST00000119680 444 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm11888-201ENSMUST00000120471 810 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm5742-201ENSMUST00000120764 505 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm14848-201ENSMUST00000121850 467 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm14262-201ENSMUST00000148309 326 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm23479-201ENSMUST00000158876 122 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Olfr93-201ENSMUST00000171679 1045 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm2404-201ENSMUST00000196197 844 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm2796-201ENSMUST00000204007 496 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm44212-201ENSMUST00000205016 897 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm18892-201ENSMUST00000217628 881 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 AC154851.2-201ENSMUST00000222172 644 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm31126-201ENSMUST00000222366 533 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 AC154528.3-201ENSMUST00000228011 679 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 1700017D01Rik-201ENSMUST00000025635 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Morn3-202ENSMUST00000045843 904 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Ccdc42-201ENSMUST00000063006 1029 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Olfr815-201ENSMUST00000071557 951 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm8894-201ENSMUST00000074642 666 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm22575-201ENSMUST00000082981 110 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm22971-201ENSMUST00000083305 97 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm5499-201ENSMUST00000090731 885 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm16421-201ENSMUST00000117616 1557 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm38021-201ENSMUST00000195687 1560 ntBASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Lyrm7-205ENSMUST00000144164 1674 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trim39Q9ESN2 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 1105.3 ms