Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phf1Q9Z1B8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phf1Q9Z1B8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Phf1Q9Z1B8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Phf1Q9Z1B8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Phf1Q9Z1B8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Gm12933-201ENSMUST00000120203 872 ntBASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Phf1Q9Z1B8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Phf1Q9Z1B8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Phf1Q9Z1B8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 728.4 ms