Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.35■□□□□ 0.21
Nubp1Q9R060 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.35■□□□□ 0.21
Nubp1Q9R060 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nubp1Q9R060 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nubp1Q9R060 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.34■□□□□ 0.21
Nubp1Q9R060 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nubp1Q9R060 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.34■□□□□ 0.21
Nubp1Q9R060 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Nubp1Q9R060 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.33■□□□□ 0.2
Nubp1Q9R060 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.33■□□□□ 0.2
Nubp1Q9R060 Dio3-201ENSMUST00000097228 1449 ntBASIC16.33■□□□□ 0.2
Nubp1Q9R060 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nubp1Q9R060 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.33■□□□□ 0.2
Nubp1Q9R060 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nubp1Q9R060 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nubp1Q9R060 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nubp1Q9R060 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Gm15378-201ENSMUST00000121894 207 ntBASIC16.31■□□□□ 0.2
Nubp1Q9R060 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nubp1Q9R060 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nubp1Q9R060 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nubp1Q9R060 Mir1199-201ENSMUST00000117015 119 ntBASIC16.3■□□□□ 0.2
Nubp1Q9R060 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.3■□□□□ 0.2
Nubp1Q9R060 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.3■□□□□ 0.2
Nubp1Q9R060 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.3■□□□□ 0.2
Nubp1Q9R060 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nubp1Q9R060 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nubp1Q9R060 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nubp1Q9R060 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nubp1Q9R060 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nubp1Q9R060 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Gm15565-201ENSMUST00000118890 427 ntBASIC16.29■□□□□ 0.2
Nubp1Q9R060 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.29■□□□□ 0.2
Nubp1Q9R060 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Gm37055-201ENSMUST00000191866 133 ntBASIC16.29■□□□□ 0.2
Nubp1Q9R060 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.29■□□□□ 0.2
Nubp1Q9R060 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.29■□□□□ 0.2
Nubp1Q9R060 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.29■□□□□ 0.2
Nubp1Q9R060 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nubp1Q9R060 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms