Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Scn5aQ9JJV9 Mir5122-201ENSMUST00000175004 89 ntBASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn5aQ9JJV9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Scn5aQ9JJV9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Scn5aQ9JJV9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn5aQ9JJV9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn5aQ9JJV9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.57■□□□□ 0.72
Scn5aQ9JJV9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn5aQ9JJV9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Gm18666-201ENSMUST00000190039 958 ntBASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn5aQ9JJV9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn5aQ9JJV9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Gm11927-201ENSMUST00000118472 759 ntBASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn5aQ9JJV9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.53■□□□□ 0.72
Scn5aQ9JJV9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.52■□□□□ 0.72
Scn5aQ9JJV9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn5aQ9JJV9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Scn5aQ9JJV9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Scn5aQ9JJV9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn5aQ9JJV9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn5aQ9JJV9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn5aQ9JJV9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms