Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps35Q9EQH3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Vps35Q9EQH3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps35Q9EQH3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Vps35Q9EQH3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps35Q9EQH3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Gm26571-201ENSMUST00000181399 666 ntBASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.75■□□□□ 0.59
Vps35Q9EQH3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 AV356131-201ENSMUST00000206201 750 ntBASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps35Q9EQH3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps35Q9EQH3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps35Q9EQH3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps35Q9EQH3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.72■□□□□ 0.59
Vps35Q9EQH3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Gm42569-201ENSMUST00000200539 472 ntBASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms