Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ssmem1Q9D9Y8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Nespas-201ENSMUST00000143738 1083 ntBASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.22■□□□□ 0.19
Ssmem1Q9D9Y8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssmem1Q9D9Y8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ssmem1Q9D9Y8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.21■□□□□ 0.18
Ssmem1Q9D9Y8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ssmem1Q9D9Y8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssmem1Q9D9Y8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssmem1Q9D9Y8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Gm7290-201ENSMUST00000104990 617 ntBASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Gm12918-201ENSMUST00000120234 636 ntBASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Gm15710-201ENSMUST00000121821 636 ntBASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Gm5075-201ENSMUST00000196916 622 ntBASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.18■□□□□ 0.18
Ssmem1Q9D9Y8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms