Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop56Q9D6Z1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.4■□□□□ 0.7
Nop56Q9D6Z1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nop56Q9D6Z1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Nop56Q9D6Z1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nop56Q9D6Z1 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.39■□□□□ 0.7
Nop56Q9D6Z1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nop56Q9D6Z1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nop56Q9D6Z1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nop56Q9D6Z1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop56Q9D6Z1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nop56Q9D6Z1 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nop56Q9D6Z1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms