Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim13Q9CYB0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim13Q9CYB0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim13Q9CYB0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Gm14117-201ENSMUST00000122417 843 ntBASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim13Q9CYB0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim13Q9CYB0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim13Q9CYB0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.33■□□□□ 0.37
Trim13Q9CYB0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim13Q9CYB0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim13Q9CYB0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim13Q9CYB0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Rarb-207ENSMUST00000225921 2756 ntBASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim13Q9CYB0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim13Q9CYB0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim13Q9CYB0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms