Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61bQ9CQS8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61bQ9CQS8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61bQ9CQS8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Gm13168-201ENSMUST00000121771 632 ntBASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61bQ9CQS8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Gm20049-201ENSMUST00000219950 730 ntBASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Rab3c-203ENSMUST00000224180 967 ntBASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Gm43859-201ENSMUST00000200075 1412 ntBASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61bQ9CQS8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Gm37035-201ENSMUST00000194809 2148 ntBASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61bQ9CQS8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Trmt13-210ENSMUST00000198454 880 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms