Protein–RNA interactions for Protein: Q9CQQ7

Atp5f1, ATP synthase F(0) complex subunit B1, mitochondrial, mousemouse

Known RBP Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp5f1Q9CQQ7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Atp5f1Q9CQQ7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp5f1Q9CQQ7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp5f1Q9CQQ7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp5f1Q9CQQ7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Atp5f1Q9CQQ7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Gm9959-201ENSMUST00000068277 390 ntBASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp5f1Q9CQQ7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp5f1Q9CQQ7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.29■□□□□ 0.36
Atp5f1Q9CQQ7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp5f1Q9CQQ7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp5f1Q9CQQ7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms