Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim11Q99PQ2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim11Q99PQ2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim11Q99PQ2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim11Q99PQ2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim11Q99PQ2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim11Q99PQ2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim11Q99PQ2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim11Q99PQ2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.39■■□□□ 1.01
Trim11Q99PQ2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim11Q99PQ2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim11Q99PQ2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim11Q99PQ2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim11Q99PQ2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim11Q99PQ2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms