Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.92■□□□□ 0.62
Cdk9Q99J95 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk9Q99J95 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdk9Q99J95 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk9Q99J95 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk9Q99J95 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk9Q99J95 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk9Q99J95 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdk9Q99J95 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.91■□□□□ 0.62
Cdk9Q99J95 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk9Q99J95 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdk9Q99J95 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cdk9Q99J95 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdk9Q99J95 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk9Q99J95 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.9■□□□□ 0.62
Cdk9Q99J95 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdk9Q99J95 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.89■□□□□ 0.62
Cdk9Q99J95 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdk9Q99J95 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdk9Q99J95 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Gm22238-201ENSMUST00000175222 88 ntBASIC18.89■□□□□ 0.61
Cdk9Q99J95 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk9Q99J95 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdk9Q99J95 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cdk9Q99J95 Fst-202ENSMUST00000223640 2612 ntBASIC18.87■□□□□ 0.61
Cdk9Q99J95 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk9Q99J95 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdk9Q99J95 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.86■□□□□ 0.61
Cdk9Q99J95 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.86■□□□□ 0.61
Cdk9Q99J95 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.86■□□□□ 0.61
Cdk9Q99J95 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms