Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.62■■□□□ 1.05
Smc1bQ920F6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.61■■□□□ 1.05
Smc1bQ920F6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.61■■□□□ 1.05
Smc1bQ920F6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc1bQ920F6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc1bQ920F6 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.61■■□□□ 1.05
Smc1bQ920F6 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.61■■□□□ 1.05
Smc1bQ920F6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc1bQ920F6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc1bQ920F6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Smc1bQ920F6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.61■■□□□ 1.05
Smc1bQ920F6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc1bQ920F6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.59■■□□□ 1.05
Smc1bQ920F6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc1bQ920F6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc1bQ920F6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc1bQ920F6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Smc1bQ920F6 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.58■■□□□ 1.05
Smc1bQ920F6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc1bQ920F6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc1bQ920F6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc1bQ920F6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
Smc1bQ920F6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc1bQ920F6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc1bQ920F6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc1bQ920F6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Smc1bQ920F6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc1bQ920F6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Gm38205-201ENSMUST00000192243 258 ntBASIC21.55■■□□□ 1.04
Smc1bQ920F6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc1bQ920F6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Gm13836-201ENSMUST00000121159 501 ntBASIC21.54■■□□□ 1.04
Smc1bQ920F6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Smc1bQ920F6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc1bQ920F6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc1bQ920F6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Smc1bQ920F6 Gm13534-201ENSMUST00000121169 513 ntBASIC21.53■■□□□ 1.04
Smc1bQ920F6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smc1bQ920F6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms