Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha11Q91Y19 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdha11Q91Y19 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdha11Q91Y19 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha11Q91Y19 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha11Q91Y19 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Gm7290-201ENSMUST00000104990 617 ntBASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Gm12918-201ENSMUST00000120234 636 ntBASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Gm15710-201ENSMUST00000121821 636 ntBASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Gm5075-201ENSMUST00000196916 622 ntBASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha11Q91Y19 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha11Q91Y19 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha11Q91Y19 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha11Q91Y19 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms