Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb20Q91XZ9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb20Q91XZ9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb20Q91XZ9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb20Q91XZ9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb20Q91XZ9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb20Q91XZ9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb20Q91XZ9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.02■□□□□ 0.47
Pcdhb20Q91XZ9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb20Q91XZ9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb20Q91XZ9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb20Q91XZ9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhb20Q91XZ9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb20Q91XZ9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb20Q91XZ9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms