Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb4Q91XZ6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.64■□□□□ 0.58
Pcdhb4Q91XZ6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb4Q91XZ6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb4Q91XZ6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb4Q91XZ6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Gm11421-201ENSMUST00000122124 294 ntBASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Gm45417-201ENSMUST00000209533 758 ntBASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Gm6139-201ENSMUST00000079261 882 ntBASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb4Q91XZ6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb4Q91XZ6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb4Q91XZ6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb4Q91XZ6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb4Q91XZ6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb4Q91XZ6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb4Q91XZ6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdhb4Q91XZ6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb4Q91XZ6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb4Q91XZ6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb4Q91XZ6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb4Q91XZ6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb4Q91XZ6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb4Q91XZ6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms