Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.58■□□□□ 0.57
Pcdhga9Q91XX9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga9Q91XX9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.58■□□□□ 0.56
Pcdhga9Q91XX9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Gm10602-201ENSMUST00000098239 609 ntBASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga9Q91XX9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga9Q91XX9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga9Q91XX9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga9Q91XX9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms