Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lims2Q91XD2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lims2Q91XD2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lims2Q91XD2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.34■□□□□ 0.69
Lims2Q91XD2 Gm4968-201ENSMUST00000071458 858 ntBASIC19.34■□□□□ 0.69
Lims2Q91XD2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lims2Q91XD2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.34■□□□□ 0.69
Lims2Q91XD2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lims2Q91XD2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lims2Q91XD2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lims2Q91XD2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lims2Q91XD2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lims2Q91XD2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lims2Q91XD2 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.33■□□□□ 0.69
Lims2Q91XD2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Lims2Q91XD2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lims2Q91XD2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lims2Q91XD2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lims2Q91XD2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lims2Q91XD2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lims2Q91XD2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lims2Q91XD2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.31■□□□□ 0.68
Lims2Q91XD2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lims2Q91XD2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lims2Q91XD2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lims2Q91XD2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.3■□□□□ 0.68
Lims2Q91XD2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.3■□□□□ 0.68
Lims2Q91XD2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.3■□□□□ 0.68
Lims2Q91XD2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.3■□□□□ 0.68
Lims2Q91XD2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lims2Q91XD2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lims2Q91XD2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lims2Q91XD2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lims2Q91XD2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.29■□□□□ 0.68
Lims2Q91XD2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lims2Q91XD2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lims2Q91XD2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lims2Q91XD2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lims2Q91XD2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.28■□□□□ 0.68
Lims2Q91XD2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.28■□□□□ 0.68
Lims2Q91XD2 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.28■□□□□ 0.68
Lims2Q91XD2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms