Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Trex1Q91XB0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trex1Q91XB0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trex1Q91XB0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.67■■□□□ 1.06
Trex1Q91XB0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
Trex1Q91XB0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trex1Q91XB0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trex1Q91XB0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Gm5643-201ENSMUST00000117081 966 ntBASIC21.65■■□□□ 1.06
Trex1Q91XB0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trex1Q91XB0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Trex1Q91XB0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trex1Q91XB0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trex1Q91XB0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trex1Q91XB0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trex1Q91XB0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.64■■□□□ 1.05
Trex1Q91XB0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.64■■□□□ 1.05
Trex1Q91XB0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trex1Q91XB0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trex1Q91XB0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trex1Q91XB0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Trex1Q91XB0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trex1Q91XB0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Gm11249-201ENSMUST00000117071 859 ntBASIC21.6■■□□□ 1.05
Trex1Q91XB0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trex1Q91XB0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 163.9 ms