Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx9Q91VH2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Snx9Q91VH2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx9Q91VH2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Snx9Q91VH2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx9Q91VH2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Snx9Q91VH2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx9Q91VH2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx9Q91VH2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx9Q91VH2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx9Q91VH2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Snx9Q91VH2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx9Q91VH2 Mir5133-201ENSMUST00000174955 77 ntBASIC19.73■□□□□ 0.75
Snx9Q91VH2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx9Q91VH2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx9Q91VH2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Snx9Q91VH2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx9Q91VH2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.72■□□□□ 0.75
Snx9Q91VH2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx9Q91VH2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.71■□□□□ 0.75
Snx9Q91VH2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx9Q91VH2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
Snx9Q91VH2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Gm7290-201ENSMUST00000104990 617 ntBASIC19.69■□□□□ 0.74
Snx9Q91VH2 Gm12918-201ENSMUST00000120234 636 ntBASIC19.69■□□□□ 0.74
Snx9Q91VH2 Gm15710-201ENSMUST00000121821 636 ntBASIC19.69■□□□□ 0.74
Snx9Q91VH2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Gm5075-201ENSMUST00000196916 622 ntBASIC19.69■□□□□ 0.74
Snx9Q91VH2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.69■□□□□ 0.74
Snx9Q91VH2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.69■□□□□ 0.74
Snx9Q91VH2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx9Q91VH2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx9Q91VH2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Snx9Q91VH2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx9Q91VH2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx9Q91VH2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx9Q91VH2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.68■□□□□ 0.74
Snx9Q91VH2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx9Q91VH2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx9Q91VH2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx9Q91VH2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms