Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rprd1aQ8VDS4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rprd1aQ8VDS4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rprd1aQ8VDS4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.27■□□□□ 0.68
Rprd1aQ8VDS4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rprd1aQ8VDS4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Rprd1aQ8VDS4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rprd1aQ8VDS4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rprd1aQ8VDS4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rprd1aQ8VDS4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rprd1aQ8VDS4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rprd1aQ8VDS4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rprd1aQ8VDS4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rprd1aQ8VDS4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.23■□□□□ 0.67
Rprd1aQ8VDS4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms