Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.31■□□□□ 0.52
Q8VDP2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Haglr-201ENSMUST00000100000 2085 ntBASIC18.3■□□□□ 0.52
Q8VDP2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.3■□□□□ 0.52
Q8VDP2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Q8VDP2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8VDP2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Q8VDP2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8VDP2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.29■□□□□ 0.52
Q8VDP2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.29■□□□□ 0.52
Q8VDP2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Q8VDP2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Q8VDP2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Q8VDP2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q8VDP2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q8VDP2 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.27■□□□□ 0.52
Q8VDP2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Q8VDP2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q8VDP2 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.27■□□□□ 0.52
Q8VDP2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q8VDP2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q8VDP2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.27■□□□□ 0.52
Q8VDP2 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.27■□□□□ 0.52
Q8VDP2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q8VDP2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q8VDP2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q8VDP2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q8VDP2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Q8VDP2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q8VDP2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.26■□□□□ 0.51
Q8VDP2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8VDP2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Q8VDP2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.25■□□□□ 0.51
Q8VDP2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.25■□□□□ 0.51
Q8VDP2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.25■□□□□ 0.51
Q8VDP2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.25■□□□□ 0.51
Q8VDP2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8VDP2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Q8VDP2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms