Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdt1Q8R4E9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdt1Q8R4E9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Cdt1Q8R4E9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdt1Q8R4E9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Gm20760-201ENSMUST00000179197 648 ntBASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdt1Q8R4E9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Gm10252-201ENSMUST00000209541 832 ntBASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdt1Q8R4E9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Cdt1Q8R4E9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms