Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Gm18284-201ENSMUST00000172604 624 ntBASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Gm38205-201ENSMUST00000192243 258 ntBASIC17.77■□□□□ 0.44
Ubqln1Q8R317 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubqln1Q8R317 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubqln1Q8R317 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.77■□□□□ 0.43
Ubqln1Q8R317 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubqln1Q8R317 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubqln1Q8R317 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.76■□□□□ 0.43
Ubqln1Q8R317 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubqln1Q8R317 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubqln1Q8R317 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.75■□□□□ 0.43
Ubqln1Q8R317 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Ubqln1Q8R317 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Reep4-203ENSMUST00000226563 1444 ntBASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Gm42778-201ENSMUST00000199644 553 ntBASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln1Q8R317 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln1Q8R317 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln1Q8R317 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln1Q8R317 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.72■□□□□ 0.43
Ubqln1Q8R317 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln1Q8R317 Gm13234-201ENSMUST00000120010 747 ntBASIC17.72■□□□□ 0.43
Ubqln1Q8R317 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms