Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Tm6sf2Q8R1J1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Gm12933-201ENSMUST00000120203 872 ntBASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Gm10602-201ENSMUST00000098239 609 ntBASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tm6sf2Q8R1J1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tm6sf2Q8R1J1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tm6sf2Q8R1J1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tm6sf2Q8R1J1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tm6sf2Q8R1J1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Mir5133-201ENSMUST00000174955 77 ntBASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Gm6365-201ENSMUST00000054711 744 ntBASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tm6sf2Q8R1J1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tm6sf2Q8R1J1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Tm6sf2Q8R1J1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms