Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn1Q8K0T0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn1Q8K0T0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rtn1Q8K0T0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Rtn1Q8K0T0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Gm10849-201ENSMUST00000100397 618 ntBASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn1Q8K0T0 BC021767-201ENSMUST00000126387 1716 ntBASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn1Q8K0T0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Gm7514-201ENSMUST00000209475 934 ntBASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn1Q8K0T0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Gm42569-201ENSMUST00000200539 472 ntBASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn1Q8K0T0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Golph3-205ENSMUST00000228671 2842 ntBASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn1Q8K0T0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms