Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snx30Q8CE50 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Snx30Q8CE50 Gm7860-201ENSMUST00000121190 879 ntBASIC19.33■□□□□ 0.68
Snx30Q8CE50 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx30Q8CE50 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Snx30Q8CE50 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx30Q8CE50 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Snx30Q8CE50 Gm9988-201ENSMUST00000069786 435 ntBASIC19.33■□□□□ 0.68
Snx30Q8CE50 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Snx30Q8CE50 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snx30Q8CE50 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Gm10493-201ENSMUST00000097270 612 ntBASIC19.32■□□□□ 0.68
Snx30Q8CE50 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.32■□□□□ 0.68
Snx30Q8CE50 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.32■□□□□ 0.68
Snx30Q8CE50 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.31■□□□□ 0.68
Snx30Q8CE50 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Snx30Q8CE50 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Snx30Q8CE50 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Gm38205-201ENSMUST00000192243 258 ntBASIC19.29■□□□□ 0.68
Snx30Q8CE50 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.29■□□□□ 0.68
Snx30Q8CE50 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snx30Q8CE50 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Reep4-203ENSMUST00000226563 1444 ntBASIC19.28■□□□□ 0.68
Snx30Q8CE50 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.28■□□□□ 0.68
Snx30Q8CE50 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.28■□□□□ 0.68
Snx30Q8CE50 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.28■□□□□ 0.68
Snx30Q8CE50 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.28■□□□□ 0.68
Snx30Q8CE50 Rarb-207ENSMUST00000225921 2756 ntBASIC19.28■□□□□ 0.68
Snx30Q8CE50 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.28■□□□□ 0.68
Snx30Q8CE50 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx30Q8CE50 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx30Q8CE50 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx30Q8CE50 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Snx30Q8CE50 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx30Q8CE50 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx30Q8CE50 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms