Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tsen54Q8C2A2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Tsen54Q8C2A2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tsen54Q8C2A2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tsen54Q8C2A2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
Tsen54Q8C2A2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.71■□□□□ 0.1
Tsen54Q8C2A2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Tsen54Q8C2A2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tsen54Q8C2A2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tsen54Q8C2A2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Gm7143-201ENSMUST00000222811 859 ntBASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Gm9870-201ENSMUST00000063874 645 ntBASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tsen54Q8C2A2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Gm12922-201ENSMUST00000120626 809 ntBASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms