Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim35Q8C006 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim35Q8C006 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim35Q8C006 Gm8495-201ENSMUST00000188740 694 ntBASIC19.17■□□□□ 0.66
Trim35Q8C006 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim35Q8C006 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim35Q8C006 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim35Q8C006 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim35Q8C006 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim35Q8C006 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim35Q8C006 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim35Q8C006 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim35Q8C006 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim35Q8C006 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim35Q8C006 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim35Q8C006 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim35Q8C006 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim35Q8C006 Gm38216-201ENSMUST00000194872 1214 ntBASIC19.16■□□□□ 0.66
Trim35Q8C006 AC139323.1-201ENSMUST00000223370 1040 ntBASIC19.16■□□□□ 0.66
Trim35Q8C006 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Trim35Q8C006 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim35Q8C006 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.15■□□□□ 0.66
Trim35Q8C006 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim35Q8C006 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim35Q8C006 Gm42919-201ENSMUST00000197753 1284 ntBASIC19.15■□□□□ 0.66
Trim35Q8C006 Gm43060-201ENSMUST00000200621 289 ntBASIC19.15■□□□□ 0.66
Trim35Q8C006 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim35Q8C006 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim35Q8C006 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim35Q8C006 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim35Q8C006 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Trim35Q8C006 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim35Q8C006 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Gm45071-201ENSMUST00000205353 571 ntBASIC19.14■□□□□ 0.65
Trim35Q8C006 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 AC160962.2-201ENSMUST00000224761 632 ntBASIC19.14■□□□□ 0.65
Trim35Q8C006 AC125539.1-202ENSMUST00000226449 670 ntBASIC19.14■□□□□ 0.65
Trim35Q8C006 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim35Q8C006 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 CT025561.1-201ENSMUST00000214972 674 ntBASIC19.13■□□□□ 0.65
Trim35Q8C006 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim35Q8C006 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim35Q8C006 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim35Q8C006 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim35Q8C006 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim35Q8C006 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Trim35Q8C006 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim35Q8C006 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim35Q8C006 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim35Q8C006 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim35Q8C006 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim35Q8C006 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim35Q8C006 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.11■□□□□ 0.65
Trim35Q8C006 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim35Q8C006 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim35Q8C006 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim35Q8C006 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trim35Q8C006 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim35Q8C006 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim35Q8C006 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim35Q8C006 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms